Package Exports

@carisls/xmlreport-reader

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Readme

XML Report Reader

The purpose of this component is reading of standard XML documents with genomics data created by Caris Life Sciences.

Usage

const xmlReader = require('@carisls/xmlreport-reader');

const { promises: fs } = require('fs');

(async() => {
  // Get XML file contents
  const fileContents = await fs.readFile(__dirname + '/myfile.xml', 'utf8');

  // Parse XML into Report
  const report = xmlReader(fileContents);

  // Prettify report JSON
  const reportString = JSON.stringify(report, null, 2);

  // Write to console
  console.log(reportString);

})()
  .catch((err) => {
    console.error(err);
  });

Supported elements

Only few elements are currently supported for extraction:

Cancer-Relevant Biomarkers
Genomic Signatures
Immunohistochemistry (IHC)
Human Leukocyte Antigen (HLA)
Available Clinical Trials
References (supporting treatments)