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@oncojs/lolliplot

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Readme

Protein Lolliplot 🍭 📊

Visualization to view relationship between common mutations and their location on a gene.

Install

yarn

Develop

npm start

Then go to http://localhost:8080/

API

type TProteinLolliplotArgs = {
  onMutationClick: Function,
  onMutationMouseover: ?Function,
  onMutationMouseout: ?Function,
  onProteinMouseover: ?Function,
  onProteinMouseout: ?Function,
  data: Object,
  selector: string,
  element: Object,
  height: number,
  width: number,
  domainWidth: number,
  hideStats: bool,
  selectedMutationClass: string,
  mutationId: string,
  yAxisOffset: number,
  xAxisOffset: number,
}

element: the element which the viz will attach to. takes precedence over selector

selector: the selector of the element to attach the chart to

data: an object containing an array of proteins and an array of mutations (TODO: add shape)

domainWidth: The amino acid length of the transcript

onMutationClick (optional): callback that receives the data of the clicked mutation

width (optional): width of the chart

height (optional): height of the chart

hideStats (optional): if true, do not display the summary box next of the chart

selectedMutationClass (optional): sets the default filter on the mutation class (Consequence, Impact, etc)